Transposome #

• Transposome is a command line application to annotate transposable elements from paired-end whole genome shotgun data.

• This tool allows you to infer the abundance of repeat types in the genome without a reference genome sequence.

• To use Transposome, you will need Perl installed (version 5.10 or greater).

References #

• Staton SE, and Burke JM. 2015. Transposome: Annotation of transposable element families from unassembled sequence reads. Bioinformatics.

• Transposome